last updated: Thu Feb 2 13:24:14 2012

Publications by Centre Staff - 2012

3. Nichol CJ, Pieruschka R, Takayama K, Förster B, Kolber Z, Rascher U, Grace J, Robinson SA, Pogson B, Osmond B (2012) Canopy conundrums: building on the Biosphere 2 experience to scale measurements of inner and outer canopy photoprotection from the leaf to the landscape Functional Plant Biology 39: 1-24. online Impact Factor: 2.0
2. Giraud E, Van Aken O, Whelan J (2012) REDOX regulation of mitochondrial function in plants. Plant, Cell and Environment 35(2):271-280. PUBMED online Impact Factor: 4.0
1. Giraud E, Ivanova A, Gordon CS, Whelan J, Considine MJ (2012) Sulphur dioxide evokes a large scale reprogramming of the grape berry transcriptome associated with oxidative signalling and biotic defence responses. Plant cell and Environment Plant, Cell and Environment 35(2):405-17. PUBMED online Impact Factor: 4.0

2012 Statistics

  • 3 publications in 2 different journals
  • No. Impact Factor >5 <10: 0
  • No. Impact Factor >=10: 0
  • Average Impact Factor: 3.33 (10.00/3)

Publications by Centre Staff - 2011

61. Terenius O, Papanicolaou A, Garbutt JS, Eleftherianos I, Huvenne H, Kanginakudru S, Albrechtsen M, An C, Aymeric JL, Barthel A, Bebas P, Bitra K, Bravo A, Chevalier F, Collinge DP, Crava CM, de Maagd RA, Duvic B, Erlandson M, Faye I, Felföldi G, Fujiwara H, Futahashi R, Gandhe AS, Gatehouse HS, Gatehouse LN, Giebultowicz JM, Gómez I, Grimmelikhuijzen CJ, Groot AT, Hauser F, Heckel DG, Hegedus DD, Hrycaj S, Huang L, Hull JJ, Iatrou K, Iga M, Kanost MR, Kotwica J, Li C, Li J, Liu J, Lundmark M, Matsumoto S, Meyering-Vos M, Millichap PJ, Monteiro A, Mrinal N, Niimi T, Nowara D, Ohnishi A, Oostra V, Ozaki K, Papakonstantinou M, Popadic A, Rajam MV, Saenko S, Simpson RM, Soberón M, Strand MR, Tomita S, Toprak U, Wang P, Wee CW, Whyard S, Zhang W, Nagaraju J, Ffrench-Constant RH, Herrero S, Gordon K, Swevers L, Smagghe G (2011) RNA interference in Lepidoptera: an overview of successful and unsuccessful studies and implications for experimental design Journal of Insect Physiology 57(2): 231-245. online Impact Factor: 2.378
60. Tazoe, Y., Von Caemmerer, S., Estavillo, G.M., and Evans, J.R (2011) Using tunable diode laser spectroscopy to measure carbon isotope discrimination and mesophyll conductance to CO2 diffusion dynamically at different CO2 concentrations Plant, Cell and Environment 34: 580-591. PUBMED online Impact Factor: 4.0
59. Tohge T, Mettler T, Arrivault S, Carroll AJ, Stitt M, Fernie A (2011) From models to crop species: caveats and solutions for translational metabolomics Frontiers in Plant Physiology (in press). online Impact Factor: unknown
58. Fernie AR, Aharoni A, Willmitzer L, Stitt M, Tohge T, Kopka J, Carroll AJ, Saito K, Fraser PD, Deluca V (2011) Recommendations for reporting metabolite data The Plant Cell 23: 2477-2482. PUBMED online Impact Factor: 11.0
57. Kindgren P, Kremnev D, Blanco NE, de Dios Barajas López J, Fernández AP, Tellgren-Roth C, Small I, Strand A (2011) The plastid redox insensitive 2 mutant of Arabidopsis is impaired in PEP activity and high light-dependent plastid redox signalling to the nucleus Transgenic Plant Journal (in press). PUBMED online Impact Factor: unknown
56. Cazzonelli CI (2011) Carotenoids in Nature: insights from plants and beyond Functional Plant Biology 38: 833-847. Impact Factor: 2.0
55. Velten J, Cakir C, Youn E, Chen J, Cazzonelli CI (2011) Transgene Silencing and Transgene-derived siRNA Production in Tobacco Plants Homozygous for an Introduced AtMYB90 Construct PLoS ONE (in press). Impact Factor: unknown
54. Nelson DC, Scaffidi A, Dun EA, Waters MT, Flematti GR, Dixon KW, Beveridge CA, Ghisalberti EL, Smith SM (2011) F-box protein MAX2 has dual roles in karrikin and strigolactone signaling in Arabidopsis thaliana. Proceedings of the National Academy of Sciences USA 108:8897-902. PUBMED online Impact Factor: 10.0
53. Flematti GR, Scaffidi A, Dixon KW, Smith SM, Ghisalberti EL (2011) Production of the seed germination stimulant karrikinolide from combustion of simple carbohydrates J. Agriculture and Food Chemistry 59:1195-8. PUBMED online Impact Factor: 2.5
52. Flematti GR, Merritt DJ, Piggott MJ, Trengove RD, Smith SM, Dixon KW, Ghisalberti EL (2011) Burning vegetation produces cyanohydrins that liberate cyanide and stimulate seed germination. Nature Communications 2:360. PUBMED online Impact Factor: unknown
51. Waters MT, Smith SM, Nelson DC (2011) Smoke signals and seed dormancy: Where next for MAX2? Plant Signaling and Behavior 6:1418-22. PUBMED online Impact Factor: 2.0
50. Yamori W, Takahashi S, Makino A, Price GD, Badger MR, von Caemmerer S (2011) The Roles of ATP Synthase and the Cytochrome b(6)/f Complexes in Limiting Chloroplast Electron Transport and Determining Photosynthetic Capacity Plant Physiology 155(2):956-962. PUBMED online Impact Factor: 6.0
49. Cousins AB, Walker BJ, Pracharoenwattana I, Smith SM, Badger MR. (2011) Peroxisomal hydroxypyruvate reductase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release. Photosynthesis Research 108:91-100. PUBMED online Impact Factor: 2.0
48. Feher K, Whelan J, Müller S (2011) Assessing Modularity Using a Random Matrix Theory Approach Statistical Applications in Genetics and Molecular Biology 10:1 44. online Impact Factor: 1.842
47. Wu J, Wang C, Zheng L, Wang L, Chen Y, Whelan J, Shou H (2011) Ethylene is involved in the regulation of iron homeostasis in by regulating the expression of iron-acquisition-related genes in Oryza sativa. Journal of Experimental Botany 62:667-74. PUBMED online Impact Factor: 4.0
46. Narsai R, Rocha M, Geigenberger P, Whelan J, van Dongen JT (2011) Comparative analysis between plant species of transcriptional and metabolic responses to hypoxia. New Phytologist 190:472-87. PUBMED online Impact Factor: 5.0
45. Jia L, Wu Z, Hao X, Carrie C, Zheng L, Whelan J, Wu Y, Wang S, Wu P, Mao C (2011) Identification of a novel mitochondrial protein, short postembryonic roots 1 (SPR1), involved in root development and iron homeostasis in Oryza sativa. New Phytologist 189(3):843-55. PUBMED online Impact Factor: 5.0
44. Millar AH, Whelan J, Soole K, Day DA (2011) Organisation and regulation of mitochondrial respiration in plants. Annual Review of Plant Biology 62:79-104.. PUBMED online Impact Factor: 28.415
43. Kühn K, Carrie C, Giraud E, Wang Y, Meyer EH, Narsai R, des Francs-Small CC, Zhang B, Murcha MW, Whelan J (2011) he RCC1 family protein RUG3 is required for splicing of nad2 and complex I biogenesis in mitochondria of Arabidopsis thaliana. The Plant Journal 67:1067-80. PUBMED online Impact Factor: 7.0
42. Narsai R, Law SR, Carrie C, Xu L, Whelan J (2011) In depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis thaliana. Plant Physiology 157:3 1342-1362. PUBMED online Impact Factor: 6.0
41. Duncan O, Taylor NL, Carrie C, Eubel H, Kubiszewski-Jakubiak S, Zhang B, Narsai R, Millar AH, Whelan J (2011) Multiple lines of evidence localise signalling, morphology and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis thaliana. Plant Physiology 157:3 1093-1113. PUBMED online Impact Factor: 6.0
40. Colas des Francs-Small C, Kroeger T, Zmudjak M, Ostersetzer-Biran O, Rahimi N, Small I, Barkan A (2011) A PORR domain protein required for rpl2 and ccmFC intron splicing and for the biogenesis of c-type cytochromes in Arabidopsis mitochondria The Plant Journal (in press). PUBMED online Impact Factor: 7.0
39. Estavillo GM, Crisp PA, Pornsiriwong W, Wirtz M, Collinge D, Carrie C, Giraud E, Whelan J, David P, Javot H, Brearley C, Hell R, Marin E, Pogson BJ (2011) Evidence for a SAL1-PAP Chloroplast Retrograde Pathway that Functions in Drought and High Light Signaling in Arabidopsis The Plant Cell 23(11):3992-4012. PUBMED online Impact Factor: 11.0
38. Qi Y, Armbruster U, Schmitz-Linneweber C, Delannoy E, Falcon de Longevialle A, Rühle T, Small I, Jahns P, Leister D (2011) Arabidopsis CSP41 proteins form multimeric complexes that bind and stabilize distinct plastid transcripts. Journal of Experimental Botany (in press). PUBMED online Impact Factor: 4.0
37. Tanz S, Kilian J, Johnsson C, Apel K, Small I, Harter K, Wanke D, Pogson B, Albrecht V (2011) The SCO2 protein disulphide isomerase is required for thylakoid biogenesis and interacts with LCHB1 chlorophyl a/b binding proteins which affects chlorophyll biosynthesis in Arabidopsis seedlings. The Plant Journal (in press). PUBMED online Impact Factor: 7.0
36. Tanz S, Small ID (2011) In silico methods for the identification of organellar and suborganellar targeting peptides in Arabidopsis chloroplast proteins, and for predicting the topology of membrane proteins. In: Chloroplast Research In Arabidopsis: Methods and Protocols Methods in Molecular Biology 774:243-80. PUBMED online Impact Factor: unknown
35. Jacoby R, Taylor NL, Millar AH (2011) The role of mitochondrial respiration in salinity tolerance. Trends in Plant Science 16(11):614-23. PUBMED online Impact Factor: 10.0
34. Grassl J, Taylor NL, Millar AH (2011) Matrix-assisted laser desorption/ionisation mass spectrometry imaging and its development for plant protein imaging. Plant Methods 7(1):21. PUBMED online Impact Factor: 2.0
33. Shingaki-Wells RN, Huang S, Taylor NL, Millar AH (2011) Pursuing the identification of O2 deprivation survival mechanisms in plants related to selective mRNA translation, hormone-independent cellular elongation and preparation for the arrival of oxygen. Plant Signaling and Behavior 6(10):1612-5. PUBMED online Impact Factor: 2.0
32. Gleason C, Huang S, Thatcher LF, Foley RC, Anderson CR, Carroll AJ, Millar AH, Singh KB (2011) Mitochondrial complex II has a key role in mitochondrial-derived reactive oxygen species influence on plant stress gene regulation and defense. Proceedings of the National Academy of Sciences USA 108(26):10768-73. PUBMED online Impact Factor: 10.0
31. Ito J, Batth TS, Petzold CJ, Redding-Johanson AM, Mukhopadhyay A, Verboom RE, Meyer EH, Millar AH, Heazlewood JL (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Research 10:1571-82. PUBMED online Impact Factor: 5.46
30. Shingaki-Wells RN, Huang S, Taylor NL, Carroll AJ, Zhou W, Millar AH (2011) Differential molecular responses of rice and wheat coleoptiles to anoxia reveal novel metabolic adaptations in amino acid metabolism for tissue tolerance. Plant Physiology 156(4):1706-24. PUBMED online Impact Factor: 6.0
29. Meyer EH, Solheim C, Tanz SK, Bonnard G, Millar AH (2011) Insights into the composition and assembly of the membrane arm of plant complex I through analysis of subcomplexes in Arabidopsis mutant lines. The Journal of Biological Chemistry 286(29):26081-92. PUBMED online Impact Factor: 6.0
28. Hammani K, Colas des Francs-Small C, Takenaka M, Tanz SK, Okuda K, Shikanai T, Brennicke A, Small ID (2011) The pentatricopeptide repeat protein OTP87 is essential for RNA editing of nad7 and atp1 transcripts in Arabidopsis The Journal of Biological Chemistry 286(24):21361-71. PUBMED online Impact Factor: 6.0
27. Fujii S, Small ID (2011) The evolution of RNA editing and pentatricopeptide repeat genes New Phytologist 191(1):37-47. PUBMED online Impact Factor: 5.0
26. Hammani K, Gobert A, Small ID, Giegé P (2011) A PPR protein involved in regulating nuclear genes encoding mitochondrial proteins? Plant Signaling and Behavior 6(5):748-50. PUBMED online Impact Factor: 2.0
25. Cuttriss AJ, Cazzonelli CI, Wurtzel ET, Pogson BJ (2011) Vitamin A (carotenoids) In: Biosynthesis of vitamins in Plants, Advances in Botanical Research. Eds F. Rébeillé and R. Douce, Elsevier . Impact Factor: unknown
24. Pogson BJ, Albrecht V (2011) Genetic dissection of chloroplast biogenesis and development: an overview Plant Physiology 155(4):1545-51. PUBMED online Impact Factor: 6.0
23. Förster B, Pogson BJ, Osmond CB (2011) Lutein from de-epoxidation of lutein epoxide replaces zeaxanthin to sustain an enhanced capacity for non-photochemical chlorophyll fluorescence quenching in avocado shade leaves in the dark Plant Physiology 156(1):393-403. PUBMED online Impact Factor: 6.0
22. Woo NS, Gordon MJ, Graham SR, Rossel JB, Badger MR, Pogson BJ (2011) A mutation in the purine biosynthetic enzyme ATASE2 impacts high light signalling and acclimation responses in green and chlorotic sectors of Arabidopsis leaves Functional Plant Biology (in press). Impact Factor: 2.0
21. Hirsch J, Misson J, Crisp PA, David P, Bayle V, Estavillo GM, Javot H, Chiarenza S, Mallory AC, Maizel A, Declerck M, Pogson BJ, Vaucheret H, Crespi M, Desnos T, Thibaud M-C, Nussaume L, Marin E (2011) A Novel fry1 Allele Reveals the Existence of a Mutant Phenotype Unrelated to 59'->39' Exoribonuclease (XRN) Activities in Arabidopsis thaliana Roots PLoS ONE 6(2): e16724. PUBMED online Impact Factor: unknown
20. Delannoy E, Fujii S, Colas des Francs-Small C, Brundrett M, Small ID (2011) Rampant Gene Loss in the Underground Orchid Rhizanthella gardneri Highlights Evolutionary Constraints on Plastid Genomes Molecular Biology and Evolution 28(7):2077-86. PUBMED online Impact Factor: 9.872
19. Huang S, Millar AH, Taylor NL (2011) The plant mitochondrial proteome composition and stress response: conservation and divergence between monocots and dicots In: Plant Mitochondria, Vol 1. F Kempken Ed., Springer, Germany. p 535 ISBN 978-0-387-89780-6 . Impact Factor: unknown
18. Hammani K, Gobert A, Hleibieh K, Choulier L, Small ID, Giegé P (2011) An Arabidopsis dual-localized pentatricopeptide repeat protein interacts with nuclear proteins involved in gene expression regulation The Plant Cell 23(2):730-40. PUBMED online Impact Factor: 11.0
17. Poland V, Eubel H, King M, Solheim C, Millar AH, Baer BC (2011) Stored sperm differs from ejaculated sperm by proteome alterations associated with energy metabolism in the honeybee Apis mellifera Molecular Ecology 20(12):2643-54. PUBMED online Impact Factor: 6.457
16. Lee CP, Eubel H, O'Toole N, Millar AH (2011) Combining proteomics of root and shoot mitochondriaand transcript analysis to define constitutive and variable components in plant mitochondria Phytochemistry 72(10):1092-108. PUBMED online Impact Factor: 3.104
15. Taylor NL, Heazlewood JL, Millar AH (2011) The Arabidopsis thaliana 2D gel mitochondrial proteome: refining the value of reference maps for assessing protein abundance, contaminants and post-translational modifications Proteomics 11(9):1720-33. PUBMED online Impact Factor: 6.0
14. Keech O (2011) The conserved mobility of mitochondria during leaf senescence reflects differential regulation of the cytoskeletal components in Arabidopsis thaliana Plant Signaling and Behavior 6(1):147-50. PUBMED online Impact Factor: 2.0
13. Jia L, Wu Z, Hao X, Carrie C, Zheng L, Whelan J, Wu Y, Wang S, Wu P, Mao C (2011) Identification of a novel mitochondrial protein, short postembryonic roots 1 (SPR1), involved in root development and iron homeostasis in Oryza sativa New Phytologist 189(3):843-55. PUBMED online Impact Factor: 5.0
12. Narsai R, Rocha M, Geigenberger P, Whelan J, Van Dongen JT (2011) Comparative analysis between plant species of transcriptional and metabolic responses to hypoxia New Phytologist 190(2):472-487. PUBMED online Impact Factor: 5.0
11. Chateigner-Boutin A-L, Colas des Francs-Small C, Delannoy E, Kahlau S, Tanz SK, Falcon de Longevialle AF, Fujii S, Small ID (2011) OTP70 is a pentatricopeptide protein of the E subgroup involved in splicing of the plastid transcript rpoC1 The Plant Journal 65(4):532-42. PUBMED online Impact Factor: 7.0
10. Kumari M, Clarke HJ, Colas des Francs-Small C, Small ID, Khan TN, Siddique KHM (2011) Albinism does not correlate with biparental inheritance of plastid DNA in interspecific hybrids in Cicer species Plant Science 180(4):628-33. PUBMED online Impact Factor: 2.05
9. Fujii S, Bond CS, Small ID (2011) Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution Proceedings of the National Academy of Sciences USA 108(4):1723-8. PUBMED online Impact Factor: 10.0
8. Purdy SJ, Bussell JD, Nelson DC, Villadsen D, Smith SM (2011) A nuclear-localised protein KOLD SENSITIV-1 affects the expression of cold-responsive genes during prolonged chilling in Arabidopsis J. Plant Physiol 168(3):263-269. PUBMED online Impact Factor: 6.0
7. Chateigner-Boutin A-L, Small ID (2011) Organellar RNA editing WIREs RNA 2(4):493-506. PUBMED online Impact Factor: unknown
6. Joshi HJ, Hirsch-Hoffmann M, Baerenfaller K, Gruissem W, Baginsky S, Schmidt R, Shulze WX, Sun Q, Van Wijk KJ, Egelhofer V, Wienkoop S, Weckwerth W, Bruley C, Rolland N, Toyoda T, Nakagami H, Jones AME, Briggs SP, Castleden I, Tanz SK, Millar AH, Heazlewood JL (2011) MASCP Gator: An aggregation portal for the visualization of Arabidopsis proteomics data Plant Physiology 155:259-270. PUBMED online Impact Factor: 6.0
5. Price GD, Badger MR, von Caemmerer S (2011) The prospect of using cyanobacterial bicarbonate transporters to improve leaf photosynthesis in C3 crop plants Plant Physiology 155:20-26. PUBMED online Impact Factor: 6.0
4. Takahashi S, Badger MR (2011) Photoprotection in plants: a new light on photosystem II damage Trends in Plant Science 16(1):53-60. PUBMED online Impact Factor: 10.0
3. Wu J, Wang C, Zheng L, Wang L, Chen Y, Whelan J, Shou H (2011) Ethylene is involved in the regulation of iron homeostasis in by regulating the expression of iron-acquisition-related genes in Oryza sativa Journal of Experimental Botany 62(2):667-74. PUBMED online Impact Factor: 4.0
2. Scaffidi A, Flematti GR, Nelson DC, Dixon KW, Smith SM, Ghisalberti EL (2011) The synthesis and biological evaluation of labelled karrikinolides for the elucidation of the mode of action of the seed germination stimulant Tetrahedron 67(1): 152-157. online Impact Factor: 3.219
1. Albrecht V, Estavillo GM, Cuttriss AJ, Pogson BJ (2011) Identifying chloroplast biogenesis and signalling mutants in Arabidopsis thaliana Methods in Molecular Biology 684:257-72. PUBMED online Impact Factor: unknown

2011 Statistics

  • 61 publications in 32 different journals
  • No. Impact Factor >5 <10: 19
  • No. Impact Factor >=10: 9
  • Average Impact Factor: 5.99 (305.30/51)

Publications by Centre Staff - 2010

42. Giraud E, Ng S, Carrie C, Duncan O, Low J, Lee CP, Van Aken O, Millar AH, Murcha MW, Whelan J (2010) TCP transcription factors link the regulation of genes encoding mitochondrial proteins with the circadian clock in Arabidopsis thaliana The Plant Cell 22(12):3921-34. PUBMED online Impact Factor: 11.0
41. Glaser E, Whelan J (2010) Protein Import into Plant Mitochondria: Chapter 11 In: Plant Mitochondria, Advances in Plant Biology. F Kempken (Ed.), Springer, Germany: Science+Business Media LLC 2011 . online Impact Factor: unknown
40. Tognetti VB, Van Aken O, Morreel K, Vandenbroucke K, Van de Cotte B, De Clercq I, Chiwocha S, Fenske R, Prinsen E, Boerjan W, Genty B, Stubbs KA, Inzé D, Van Breusegem F (2010) Perturbation of indole-3-butyric acid homeostasis by the UDP-glucosyltransferase UGT74E2 modulates Arabidopsis architecture and water stress tolerance. The Plant Cell 22(8):2660-79. PUBMED online Impact Factor: 11.0
39. Van Aken O, Whelan J, Van Breusegem F (2010) Prohibitins: mitochondrial partners in development and stress response Trends in Plant Science 15(5):275-82. PUBMED online Impact Factor: 10.0
38. Narsai R, Ivanova A, Ng S, Whelan J (2010) Defining reference genes in Oryza sativa using organ, development, biotic and abiotic transcriptome datasets BMC Plant Biology 10:56. PUBMED online Impact Factor: 4.09
37. Zheng L, Ying Y, Wang L, Wang F, Whelan J, Shou H (2010) Identification of a novel iron regulated basic helix-loop-helix protein involved in Fe homeostasis in Oryza sativa BMC Plant Biology 10:166. PUBMED online Impact Factor: 4.09
36. Carrie C, Giraud E, Duncan O, Xu L, Wang Y, Huang S, Clifton R, Murcha MW, Filipovska A, Rackham O, Vrielink A, Whelan J (2010) Conserved and Novel Functions for Arabidopsis thaliana MIA40 in Assembly of Proteins in Mitochondria and Peroxisomes The Journal of Biological Chemistry 285(46):36138-48. PUBMED online Impact Factor: 6.0
35. Albrecht V, Simková K, Carrie C, Delannoy E, Giraud E, Whelan J, Small ID, Apel K, Badger MR, Pogson BJ (2010) The Cytoskeleton and the Peroxisomal-Targeted SNOWY COTYLEDON3 Protein Are Required for Chloroplast Development in Arabidopsis The Plant Cell 22(10):3423-38. PUBMED online Impact Factor: 11.0
34. Carrie C, Murcha MW, Whelan J (2010) An in Silico Analysis of the Mitochondrial Protein Import Apparatus of Plants BMC Plant Biology 10(1):249. PUBMED online Impact Factor: 4.09
33. Narsai R, Castleden I, Whelan J (2010) Common and distinct organ and stress responsive transcriptomic patterns in Oryza sativa and Arabidopsis thaliana BMC Plant Biology 10:262. PUBMED online Impact Factor: 4.09
32. Bastow R, Beynon J, Estelle M, Friesner J, Grotewold E, Lavagi I, Lindsey K, Meyers B, Provart N, Benfey P, Birney E, Braun P, Brendel V, Buell R, Caccamo M, Carrington J, Cherry M, Ecker JR, Eppig J, Forster M, Gutiérrez R, Hilson P, Huala E, Katari M, Kersey P, Kudla J, Ma H, Matsui M, Matthews K, May S, Mayer K, Millar AH, Mjolsness E, Mockler T, Nikolau B, Nordborg M, Rawlings C, Schofield P, Schoof H, Schroeder JI, Sen TZ, Stanzione D, Town C, Toyoda T, Vision T, Walsh S, Wang X, Ware D, Weckwerth W, Yang W (2010) An international bioinformatics infrastructure to underpin the Arabidopsis community The Plant Cell 22:2530-6. PUBMED online Impact Factor: 11.0
31. Jacoby RP, Millar AH, Taylor NL (2010) Wheat mitochondrial proteomes provide new links between antioxidant defence and plant salinity tolerance J. Proteome Research 9(12):6595-604. PUBMED online Impact Factor: 5.46
30. Takahashi S, Milward SE, Yamori W, Evans JR, Hillier W, Badger MR (2010) The solar action spectrum of photosystem II damage Plant Physiology 153:988-93. PUBMED online Impact Factor: 6.0
29. Cousins AB, Ghannoum O, von Caemmerer S, Badger MR (2010) Simultaneous determination of Rubisco carboxylase and oxygenase kinetic parameters in Triticum aestivum and Zea mays using membrane inlet mass spectrometry Plant, Cell and Environment 33(3): 444-452. PUBMED online Impact Factor: 4.0
28. Mubarakshina MM, Ivanov BN, Naydov IA, Hillier W, Badger MR, Krieger-Liszkay A (2010) Production and diffusion of chloroplastic H2O2 and its implication to signalling Journal of Experimental Botany 61(13): 3577-3587. PUBMED online Impact Factor: 4.0
27. Nelson DC, Flematti GR, Riseborough JA, Ghisalberti EL, Dixon KW, Smith SM (2010) Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana Proceedings of the National Academy of Sciences USA 107(15):7095-7100. PUBMED online Impact Factor: 10.0
26. Che P, Bussell JD, Zhou W, Estavillo GM, Pogson BJ, Smith SM (2010) Signaling from the endoplasmic reticulum activates brassinosteroid signaling and promotes acclimation to stress in Arabidopsis Science Signaling 3(141):ra69. PUBMED online Impact Factor: 6.12
25. Pracharoenwattana I, Zhou W, Smith SM (2010) Fatty acid beta-oxidation in germinating Arabidopsis seeds is supported by peroxisomal hydroxypyruvate reductase when malate dehydrogenase is absent Plant Molecular Biology 72:101-109. PUBMED online Impact Factor: 3.0
24. Francisco P, Li J, Smith SM (2010) The gene encoding the catalytically-inactive β-amylase BAM4 involved in starch breakdown in Arabidopsis leaves is expressed preferentially in vascular tissues in source and sink organs J. Plant Physiol 167(11):890-895. PUBMED online Impact Factor: 6.0
23. Pracharoenwattana I, Zhou W, Keech O, Francisco PB, Udomchalothorn T, Tschoep H, Stitt M, Gibon Y, Smith SM (2010) Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen The Plant Journal 62(5):785-95. PUBMED online Impact Factor: 7.0
22. Flematti GR, Scaffidi A, Goddard-Borger ED, Heath CH, Nelson DC, Commander LE, Stick RV, Dixon KW, Smith SM, Ghisalberti EL (2010) Structure-activity relationship of karrikin germination stimulants J. Agriculture and Food Chemistry 58:8612-7. PUBMED online Impact Factor: 2.5
21. Keech O, Pesquet E, Gutierrez L, Ahad A, Bellini C, Smith SM, Gardeström P (2010) Leaf senescence is accompanied by an early disruption of the microtubule network in Arabidopsis thaliana Plant Physiology 154(4):1710-1720. PUBMED online Impact Factor: 6.0
20. Tomaz T, Bagard M, Pracharoenwattana I, Lindén P, Lee CP, Carroll AJ, Ströher E, Smith SM, Gardeström P, Millar AH (2010) Mitochondrial malate dehydrogenase lowers leaf respiration and alters photorespiration and plant growth in Arabidopsis Plant Physiology 154(3):1143-57. PUBMED online Impact Factor: 6.0
19. Taylor NL, Howell KA, Heazlewood JL, Tan TYW, Narsai R, Huang S, Whelan J, Millar AH (2010) Analysis of the rice mitochondrial carrier family reveals anaerobic accumulation of a basic amino acid carrier involved in arginine metabolism during seed germination Plant Physiology 154(2):691-704. PUBMED online Impact Factor: 6.0
18. Koprivova A, Colas des Francs-Small C, Calder G, Mugford ST, Tanz SK, Lee BR, Zechmann B, Small ID, Kopriva S (2010) Identification of a pentatricopeptide repeat protein implicated in splicing of intron 1 of mitochondrial nad7 transcripts The Journal of Biological Chemistry 285(42):32192-9. PUBMED online Impact Factor: 6.0
17. Falcon de Longevialle AF, Small ID, Lurin C (2010) Nuclearly Encoded Splicing Factors Implicated in RNA Splicing in Higher Plant Organelles Molecular Plant 3(4):691-705. PUBMED online Impact Factor: unknown
16. Carroll AJ, Badger MR, Millar AH (2010) The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets BMC Bioinformatics 11(1):376. PUBMED online Impact Factor: 3.03
15. Lee CP, Eubel H, Millar AH (2010) Diurnal Changes in Mitochondrial Function Reveal Daily Optimisation of Light and Dark Respiratory Metabolism in Arabidopsis Molecular and Cellular Proteomics 9(10):2125-39. PUBMED online Impact Factor: 10.0
14. Atkin O, Millar AH, Turnbull M (2010) Plant respiration in a changing world New Phytologist 187(2):268-72. PUBMED online Impact Factor: 5.0
13. Chen W, Chi Y, Taylor NL, Lambers H, Finnegan PM (2010) Disruption of ptLPD1 or ptLPD2, genes that encode isoforms of the plastidial lipoamide dehydrogenase, confers arsenate hypersensitivity in Arabidopsis thaliana Plant Physiology 153(3):1385-97. PUBMED online Impact Factor: 6.0
12. Velten J, Cakir C, Cazzonelli CI (2010) A Spontaneous Dominant-Negative Mutation within a 35S::AtMYB90 Transgene Inhibits Flower Pigment Production in Tobacco PLoS ONE 5(3): e9917. PUBMED online Impact Factor: unknown
11. Cazzonelli CI, Pogson BJ (2010) Source to sink: regulation of carotenoid biosynthesis in plants Trends in Plant Science 15(5): 266-74. PUBMED online Impact Factor: 10.0
10. Cazzonelli CI, Nisar N, Hussain D, Carmody M, Pogson BJ (2010) Chapter 7: Biosynthesis and Regulation of Carotenoids in Plants- micronutrients, vitamins and health benefits. In: Plant Developmental Biology-Biotechnology Perspectives. Eng Chong Pua, Micheal R Davey (Eds.) Springer, Germany. (ISBN 978-3-642-04877-7) . Impact Factor: unknown
9. Den Boer SPA, Baer BC, Boomsma JJ (2010) Seminal fluid mediates ejaculate competition in social insects Science 327: 1506-9. PUBMED online Impact Factor: 31.364
8. Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW (2010) Hypoxia responsive MicroRNAs and trans-acting small interfering RNAs Journal of Experimental Botany 61(1):165-77. PUBMED online Impact Factor: 4.0
7. Tan YF, O'Toole N, Taylor NL, Millar AH (2010) Divalent metal ions in plant mitochondria and their role in interactions with protein and oxidative stress induced damage to respiratory function Plant Physiology 152(2):747-61. PUBMED online Impact Factor: 6.0
6. David P, Colas des Francs-Small C, Sévignac M, Thareau V, Macadré C, Langin T, Geffroy V (2010) Three highly similar formate dehydrogenase genes located in the vicinity of the B4 resistance gene cluster are differentially expressed under biotic and abiotic stresses in Phaseolus vulgaris Theoretical and Applied Genetics 121(1): 87-103. PUBMED online Impact Factor: 3.264
5. Chai T-T, Simmonds D, Day DA, Colmer TD, Finnegan PM (2010) Photosynthetic performance and fertility are repressed in GmAOX2b antisense soybean Plant Physiology 152(3):1638-49. PUBMED online Impact Factor: 6.0
4. Chateigner-Boutin A-L, Small ID (2010) Plant RNA editing RNA Biology 7(2): 213-219. PUBMED online Impact Factor: 5.597
3. Huang S, Taylor NL, Narsai R, Eubel H, Whelan J, Millar AH (2010) Functional and composition differences between mitochondrial complex II in Arabidopsis and rice are correlated with the complex genetic history of the enzyme Plant Molecular Biology 72(3):331-42. PUBMED online Impact Factor: 3.0
2. Okuda K, Hammani K, Tanz SK, Peng L, Fukao Y, Myouga F, Motohashi R, Shinozaki K, Small ID, Shikanai T (2010) The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts The Plant Journal 61(2):339-49. PUBMED online Impact Factor: 7.0
1. Cazzonelli CI, Roberts AC, Carmody M, Pogson BJ (2010) Transcriptional control of SET DOMAIN GROUP 8 and CAROTENOID ISOMERASE during Arabidopsis development Molecular Plant 3(1):174-91. PUBMED online Impact Factor: unknown

2010 Statistics

  • 42 publications in 23 different journals
  • No. Impact Factor >5 <10: 15
  • No. Impact Factor >=10: 9
  • Average Impact Factor: 6.88 (254.70/37)

Publications by Centre Staff - 2009

52. Matthew Timmins M, Zhou W, Rupprecht J, Lim L, Thomas-Hall SR, Doebbe A, Kruse O, Hankamer B, Marx UC, Smith SM, Schenk PM (2009) The metabolome of Chlamydomonas reinhardtii following induction of anaerobic H2 production by sulfur depletion. The Journal of Biological Chemistry 284:23415-25. PUBMED online Impact Factor: 6.0
51. Chiwocha SDS, Dixon KW, Flematti GR, Ghisalberti EL, Merritt DJ, Nelson DC, Riseborough JAM, Smith SM, Stevens JC (2009) Karrikins: A new family of plant growth regulators in smoke. Plant Science 177:252-256. online Impact Factor: 2.05
50. Nelson DC, Riseborough JA, Flematti GR, Stevens J, Ghisalberti EL, Dixon KW, Smith SM (2009) Karrikins discovered in smoke trigger Arabidopsis seed germination by a mechanism requiring gibberellic acid synthesis and light. Plant Physiology 149:863-73. PUBMED online Impact Factor: 6.0
49. Badger MR, Fallahi H, Kaines S, Takahashi S (2009) Chlorophyll fluorescence screening of Arabidopsis thaliana for CO2 sensitive photorespiration and photoinhibition mutants Functional Plant Biology 36: 867-873. PUBMED online Impact Factor: 2.0
48. Beckmann K, Messinger J, Badger MR, Wydrzynski T, Hillier W (2009) On-line mass spectrometry: membrane inlet sampling Photosynthesis Research 102: 511-522. PUBMED online Impact Factor: 2.0
47. Tazoe Y, von Caemmerer S, Badger MR, Evans JR (2009) Light and CO2 do not affect the mesophyll conductance to CO2 diffusion in wheat leaves Journal of Experimental Botany 60(8):2291-2301. PUBMED online Impact Factor: 4.0
46. Takahashi S, Whitney S, Badger MR (2009) Different thermal sensitivity of the repair of photodamaged photosynthetic machinery in cultured Symbiodinium species Proceedings of the National Academy of Sciences USA 106(9):3237-3242. PUBMED online Impact Factor: 10.0
45. Takahashi S, Milward SE, Fan D-Y, Chow WS, Badger MR (2009) How does cyclic electron flow alleviate photoinhibition in Arabidopsis? Plant Physiology 149(3):1560-1567. PUBMED online Impact Factor: 6.0
44. Gutierrez L, Bussell JD, Păcurar DI, Schwambach J, Păcurar M, Bellini C (2009) Phenotypic Plasticity of Adventitious Rooting in Arabidopsis is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance The Plant Cell 21:3119-3132. PUBMED online Impact Factor: 11.0
43. Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Zhen, Ngo Que-Minh, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR (2009) Human DNA methylomes at base resolution show widespread epigenomic differences Nature 462(7271): 315-322. PUBMED online Impact Factor: 31.4
42. Hammani K, Okuda K, Tanz SK, Chateigner-Boutin A-L, Shikanai T, Small ID (2009) A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites Plant Cell The Plant Cell 21(11):3686-9. PUBMED online Impact Factor: 11.0
41. Li J, Franscisco P, Zhou W, Edner C, Steup M, Ritte G, Bond CS, Smith SM (2009) Catalytically-inactive β-amylase BAM4 required for starch breakdown in Arabidopsis leaves is a starch-binding-protein Archives of Biochemistry and Biophysics 489(1-2):92-8. PUBMED online Impact Factor: 2.85
40. Meyer EH, Tomaz T, Carroll AJ, Estavillo GM, Delannoy E, Tanz SK, Small ID, Pogson BJ, Millar AH (2009) Remodeled respiration in ndusf4 with low phosphorylation efficiency suppresses Arabidopsis germination and growth and alters control of metabolism at night Plant Physiology 151(2):603-19. PUBMED online Impact Factor: 6.0
39. Kühn K, Richter U, Meyer EH, Delannoy E, Falcon de Longevialle AF, O'Toole N, Börner T, Millar AH, Small ID, Whelan J (2009) Phage-Type RNA Polymerase RPOTmp Performs Gene-Specific Transcription in Mitochondria of Arabidopsis thaliana The Plant Cell Sep;21(9):2762-79. PUBMED online Impact Factor: 11.0
38. Van Aken O, Zhang B, Carrie C, Uggalla V, Paynter E, Giraud E, Whelan J (2009) Defining the Mitochondrial Stress Response in Arabidopsis thaliana Molecular Plant 2(6):1310-24. PUBMED online Impact Factor: unknown
37. Zheng L, Huang F, Narsai R, Wu J, Giraud E, He F, Cheng L, Wang F, Wu P, Whelan J, Shou H (2009) Physiological and transcriptome analysis of iron and phosphorus interaction in rice seedlings Plant Physiology 151(1):262-74. PUBMED online Impact Factor: 6.0
36. Rackham O, Davies SM, Shearwood AM, Hamilton KL, Whelan J, Filipovska A (2009) Pentatricopeptide repeat domain protein 1 lowers the levels of mitochondrial leucine tRNAs in cells Nucleic Acids Research 37(17):5859-67. PUBMED online Impact Factor: 8.0
35. Narsai R, Howell KA, Carroll A, Ivanova A, Millar AH, Whelan J (2009) Defining core metabolic and transcriptomic responses to oxygen availability in rice embryos and young seedlings Plant Physiology 151(1):306-22. PUBMED online Impact Factor: 6.0
34. Kim E-H, Li X-P, Razeghifard R, Anderson JM, Niyogi KK, Pogson BJ, Chow WS (2009) The multiple roles of light-harvesting chlorophyll a.b-protein complexes define structure and optimize function of Arabidopsis chloroplasts: a study using two chlorophyll b-less mutants Biochimica et Biophysica Acta - Bioenergetics 1787(8): 973-984. PUBMED online Impact Factor: 4.663
33. Kumari M, Clarke HJ, Small ID, Siddique KHM (2009) Albinism in plants: a major bottleneck in wide hybridization, androgenesis and doubled haploid culture Critical Reviews in Plant Sciences 28(6): 393-409. online Impact Factor: 4.8
32. Ito J, Taylor NL, Castleden I, Weckwerth W, Millar AH, Heazlewood JL (2009) A survey of the Arabidopsis thaliana mitochondrial phosphoproteome Proteomics Proteomics 9(17):4229-4240. PUBMED online Impact Factor: 6.0
31. Baer BC, Eubel H, Taylor NL, O'Toole N, Millar AH (2009) Insights into female sperm storage from the spermathecal fluid proteome of the honeybee Apis mellifera Genome Biology 10(6):R67. PUBMED online Impact Factor: 10.0
30. Delannoy E, Le Ret M, Faivre-Nitschke E, Estavillo GM, Bergdoll M, Taylor NL, Pogson BJ, Small ID, Imbault P, Gualberto JM (2009) Arabidopsis tRNA adenosine deaminase (TADA) is responsible for editing the wobble nucleotide of chloroplast tRNAArg(ACG), a modification essential for efficient chloroplast translation The Plant Cell 21(7):2058-71. PUBMED online Impact Factor: 11.0
29. Tan KC, Heazlewood JL, Millar AH, Oliver RP, Solomon PS (2009) Proteomic identification of extracellular proteins regulated by the Gna1 Gα subunit in Stagonospora nodorum Mycological Research 113(5):523-31. PUBMED Impact Factor: 2.0
28. Lanet E, Delannoy E, Sormani R, Floris M, Brodersen P, Crété P, Voinnet O, Robaglia C (2009) Biochemical evidence for translational repression by plant microRNAs The Plant Cell 21(6):1762-8. PUBMED online Impact Factor: 11.0
27. Davies SM, Rackham O, Shearwood AM, Hamilton KL, Narsai R, Whelan J, Filipovska A (2009) Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation FEBS Letters 583(12):1853-8. PUBMED online Impact Factor: 3.0
26. Marti MC, Olmos E, Calvete JJ, Diaz I, Barranco-Medina S, Whelan J, Lazaro JJ, Sevilla F, Jimenez A (2009) Mitochondrial and nuclear localization of a novel pea thioredoxin: identification of its mitochondrial target proteins Plant Physiology 150(2):646-57. PUBMED online Impact Factor: 6.0
25. Van Aken O, Giraud E, Clifton R, Whelan J (2009) Alternative oxidase: a target and regulator of stress responses Physiologia Plantarum 137(4):354-61. PUBMED online Impact Factor: 2.0
24. Huang S, Taylor NL, Whelan J, Millar AH (2009) Refining the definition of plant mitochondrial presequences through analysis of sorting signals, N-terminal modifications and cleavage motifs Plant Physiology 150(3):1272-85. PUBMED online Impact Factor: 6.0
23. Giraud E, Van Aken O, Ho L, Whelan J (2009) The transcription factor ABI4 is a regulator of mitochondrial retrograde expression of Alternative oxidase 1a Plant Physiology 150(3):1286-96. PUBMED online Impact Factor: 6.0
22. Millar AH, Carrie C, Pogson BJ, Whelan J (2009) Exploring the function-location nexus: using multiple lines of evidence in defining the subcellular location of plant proteins The Plant Cell 21(6):1625-31. PUBMED online Impact Factor: 11.0
21. Bond DM, Dennis ES, Pogson BJ, Finnegan EJ (2009) Histone acetylation, VERNALIZATION INSENSITIVE 3, FLOWERING LOCUS C and the vernalization response Molecular Plant 2: 724-737. PUBMED online Impact Factor: unknown
20. Bond DM, Wilson I, Dennis ES, Pogson BJ, Finnegan EJ (2009) VERNALIZATION INSENSITIVE 3 (VIN3) is required for the response of Arabidopsis thaliana seedlings exposed to low oxygen conditions The Plant Journal 59(4):576-87. PUBMED online Impact Factor: 7.0
19. Howitt CA, Cavanagh C, Bowerman AF, Cazzonelli CI, Rampling L, Mimica JL, Pogson BJ (2009) Alternative splicing, activation of cryptic exons and amino acid substitutions in carotenoid biosynthetic genes are associated with lutein accumulation in wheat endosperm Functional and Integrative Genomics 9(3):363-76. PUBMED online Impact Factor: 4.0
18. Cazzonelli CI, Finnegan J, Pogson BJ (2009) Promoting gene expression in plants by permissive histone lysine methylation Plant Signaling and Behavior Jun;4(6):484-8. PUBMED online Impact Factor: 2.0
17. Cazzonelli CI, Yin K, Pogson BJ (2009) Potential implications for epigenetic regulation of carotenoid biosynthesis during root and shoot development Plant Signaling and Behavior Apr;4(4):339-41. PUBMED online Impact Factor: 2.0
16. Tillich M, Hardel SL, Kupsch C, Armbruster U, Delannoy E, Gualberto J, Leister D, Small ID, Schmitz-Linneweber C (2009) Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs Proceedings of the National Academy of Sciences USA 106(14):6002-7. PUBMED online Impact Factor: 10.0
15. Okuda K, Chateigner-Boutin A-L, Nakamura T, Delannoy E, Sugita M, Myougaf F, Motohashi R, Shinozaki K, Small ID, Shikanai T (2009) Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts The Plant Cell 21(1):146-56. PUBMED online Impact Factor: 11.0
14. Cazzonelli CI, Cuttriss AJ, Cossetto SB, Pye W, Crisp P, Whelan J, Finnegan EJ, Turnbull C, Pogson BJ (2009) Regulation of Carotenoid Composition and Shoot Branching in Arabidopsis by a Chromatin Modifying Histone Methyltransferase, SDG8 The Plant Cell 21(1): 39-53. PUBMED online Impact Factor: 11.0
13. Förster B, Osmond CB, Pogson BJ (2009) De-novo Synthesis and Degradation of Lx- and V-cycle Pigments during Shade and Sun Acclimation in Avocado Leaves (P. americana) Plant Physiology 149(2):1179-95. PUBMED online Impact Factor: 6.0
12. Wiszniewski AAG, Zhou W, Smith SM, Bussell JD (2009) Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl:CoA transferase-like protein required for responses to pro-auxins Plant Molecular Biology 69(5):503-515. PUBMED online Impact Factor: 3.0
11. Wilson P, Estavillo GM, Field K, Pornsiriwong W, Carroll AJ, Howell KA, Woo NS, Lake J, Smith S, Millar AH, von Caemmerer S, Pogson BJ (2009) The nucleotidase/phosphatase, SAL1, is a negative regulator of drought tolerance in Arabidopsis The Plant Journal 58(2):299-317. PUBMED online Impact Factor: 7.0
10. Taylor NL, Millar AH (2009) Long bugs to small plants — the role of Lon1 in protein stability and thermotolerance New Phytologist 181(3): 505-508. PUBMED online Impact Factor: 5.0
9. Howell KA, Narsai R, Carroll A, Ivanova A, Lohse M, Usadel B, Millar AH, Whelan J (2009) Mapping metabolic and transcript temporal switches during germination in Oryza sativa highlights specific transcription factors and the role of RNA instability in the germination process Plant Physiology 149(2):961-80. PUBMED online Impact Factor: 6.0
8. Carrie C, Giraud E, Whelan J (2009) Protein transport in organelles: Dual Targeting of Proteins to Mitochondria and Chloroplasts FEBS Journal 276(5):1187-95. PUBMED online Impact Factor: 3.0
7. Zhou W, Cheng Y, Yap A, Chateigner-Boutin A-L, Delannoy E, Hammani K, Small ID, Huang J (2009) The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth The Plant Journal 58(1):82-96. PUBMED online Impact Factor: 7.0
6. Baer BC, Heazlewood JL, Taylor NL, Eubel H, Millar AH (2009) The seminal fluid proteome of the honeybee Apis mellifera Proteomics 9(8):2085-97. PUBMED online Impact Factor: 6.0
5. Sappl P, Carroll AJ, Clifton R, Lister R, Whelan J, Millar AH, Singh K (2009) The Arabidopsis glutathione transferase gene family displays complex stress regulation and co-silencing multiple genes results in altered metabolic sensitivity to oxidative stress The Plant Journal 58(1):53-68. PUBMED online Impact Factor: 7.0
4. Huang S, Taylor NL, Narsai R, Eubel H, Whelan J, Millar AH (2009) Experimental analysis of the rice mitochondrial proteome, its biogenesis and heterogeneity Plant Physiology 149(2):719-34. PUBMED online Impact Factor: 6.0
3. Taylor NL, Tan YF, Jacoby RP, Millar AH (2009) Abiotic environmental stress induced changes in the Arabidopsis thaliana chloroplast, mitochondria and peroxisome proteomes Journal of Proteomics 72(3):367-78. PUBMED online Impact Factor: 6.0
2. Carrie C, Kühn K, Murcha MW, Duncan O, Small ID, O'Toole N, Whelan J (2009) Approaches to Defining Dual-Targeted Proteins in Arabidopsis The Plant Journal 57(6):1128-39. PUBMED online Impact Factor: 7.0
1. Kreuzwieser J, Hauberg J, Howell J, Carroll J, Rennenberg H, Millar AH, Whelan J (2009) Differential response of poplar (P. x canescens) leaves and roots underpin stress adaptation during hypoxia Plant Physiology 149(1):461-73. PUBMED online Impact Factor: 6.0

2009 Statistics

  • 52 publications in 26 different journals
  • No. Impact Factor >5 <10: 22
  • No. Impact Factor >=10: 12
  • Average Impact Factor: 6.74 (336.76/50)

Publications by Centre Staff - 2008

40. Pracharoenwattana I, Smith SM (2008) When is a peroxisome not a peroxisome? Trends in Plant Science 13(10): 522-525. PUBMED online Impact Factor: 10.0
39. Cousins AB, Pracharoenwattana I, Zhou W, Smith SM, Badger MR (2008) Peroxisomal malate dehydrogenase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release Plant Physiology 148(2):786-95. PUBMED online Impact Factor: 6.0
38. Fallahi H, Scofield GN, Badger MR, Chow WS, Furbank RT, Ruan YL (2008) Localization of sucrose synthase in developing seed and siliques of Arabidopsis thaliana reveals diverse roles for SUS during development Journal of Experimental Botany 59(12):3283-95. PUBMED online Impact Factor: 4.0
37. Giraud E, Ho LH, Clifton R, Carroll A, Estavillo GM, Tan YF, Howell KA, Ivanova A, Pogson BJ, Millar AH, Whelan J (2008) The absence of Alternative Oxidase 1a in Arabidopsis thaliana results in acute sensitivity to combined light and drought stress Plant Physiology 147(2): 595-610. PUBMED online Impact Factor: 6.0
36. Weckwerth W, Baginsky S, Van Wijk KJ, Heazlewood JL, Millar AH (2008) The multinational Arabidopsis steering subcommittee for proteomics assembles the largest proteome database resource for plant systems biology J. Proteome Research 7(10):4209-10. PUBMED online Impact Factor: 5.46
35. Woo NS, Badger MR, Pogson BJ (2008) A rapid, non-invasive procedure for quantitative assessment of drought survival using chlorophyll fluorescence Plant Methods 4(1):27. PUBMED online Impact Factor: 2.0
34. Schmitz-Linneweber C, Small ID (2008) Pentatricopeptide repeat proteins: a socket set for organelle gene expression Trends in Plant Science 13(12):663-70. PUBMED online Impact Factor: 10.0
33. Eubel H, Meyer EH, Taylor NL, Bussell JD, O'Toole N, Heazlewood JL, Castleden I, Small ID, Smith SM, Millar AH (2008) Novel proteins, putative membrane transporters and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes Plant Physiology 148(4):1809-29. PUBMED online Impact Factor: 6.0
32. Zhu Z, Tovchigrechko A, Baronova T, Gao Y, Douguet D, O'Toole N, Vakser IA (2008) Large-scale structural modeling of protein complexes at low resolution. Journal of Bioinformatics and Computational Biology 6(4):789-810. PUBMED online Impact Factor: unknown
31. Garmier M, Carroll AJ, Delannoy E, Vallet C, Day DA, Small ID, Millar AH (2008) Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis Plant Physiology 148(3):1324-1341. PUBMED online Impact Factor: 6.0
30. Tan KC, Solomon PS, Heazlewood JL, Millar AH, Oliver RP (2008) A signaling-regulated short-chain dehydrogenase of Stagonospora nodorum regulates asexual development Eukaryotic Cell 7(11):1916-1929. PUBMED online Impact Factor: 4.0
29. Carrie C, Murcha MW, Kühn K, Duncan O, Barthet MM, Smith PM, Eubel H, Meyer E, Day DA, Millar AH, Whelan J (2008) Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana FEBS Letters 582(20):3073-3079. PUBMED online Impact Factor: 3.0
28. Pogson BJ, Woo NS, Förster B, Small ID (2008) Plastid signalling to the nucleus and beyond. Trends in Plant Science 13(11): 602-609. PUBMED online Impact Factor: 10.0
27. Chateigner-Boutin A-L, Ramos-Vega M, Guevara-García A, Andrés C, de la Luz Gutiérrez-Nava M, Cantero A, Delannoy E, Jiménez LF, Lurin C, Small ID, León P (2008) CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts. The Plant Journal 56(4):590-602. PUBMED online Impact Factor: 7.0
26. Ho LHM, Giraud E, Uggalla V, Lister R, Clifton R, Glen A, Thirkettle-Watts D, Van Aken O, Whelan J (2008) Identification of regulatory pathways controlling gene expression of stress responsive mitochondrial proteins in Arabidopsis Plant Physiology 147(4): 1858-1873. PUBMED online Impact Factor: 6.0
25. Falcon de Longevialle AF, Hendrickson L, Taylor NL, Delannoy E, Lurin C, Badger MR, Millar AH, Small ID (2008) The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana The Plant Journal 56(1):157-68. PUBMED online Impact Factor: 7.0
24. Gregory BD, O'Malley RC, Lister R, Urich MA, Tonti-Filippini J, Chen H, Millar AH, Ecker JR (2008) A Link between RNA Metabolism and Silencing Affecting Arabidopsis Development Developmental Cell 14(6):854-866. PUBMED online Impact Factor: 15.0
23. Armstrong AF, Badger MR, Day DA, Barthet MM, Smith PMC, Millar AH, Whelan J, Atkin OK (2008) Dynamic changes in the mitochondrial electron transport chain underpinning cold acclimation of leaf respiration Plant, Cell and Environment 31(8): 1156-1169. PUBMED online Impact Factor: 4.0
22. O'Toole N, Hattori M, Andrés C, Iida K, Lurin C, Schmitz-Linneweber C, Sugita M, Small ID (2008) On the expansion of the pentatricopeptide repeat gene family in plants Molecular Biology and Evolution 25(6):1120-1128. PUBMED online Impact Factor: 9.872
21. Lister R, O'Malley RC, Tonti-Filippini J, Gregory BD, Berry CC, Millar AH, Ecker JR (2008) Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis Cell 133(3):523-36. PUBMED online Impact Factor: 32.401
20. Velten J, Pogson BJ, Cazzonelli CI (2008) Luciferase as a reporter of gene activity in plants Transgenic Plant Journal 2(1): 1-13. Impact Factor: unknown
19. Huang S, Colmer TD, Millar AH (2008) Does anoxia tolerance involve altering the energy currency towards PPi? Trends in Plant Science 13(5):221-227. PUBMED online Impact Factor: 10.0
18. Lee C-P, Eubel H, O'Toole N, Millar AH (2008) Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Molecular and Cellular Proteomics 7(7):1297-316. PUBMED online Impact Factor: 10.0
17. Fulton DC, Stettler M, Mettler T, Vaughan CK, Li J, Franscisco P, Gil M, Reinhold H, Messerli G, Eicke S, Dorkin G, Halliday K, Smith AM, Smith SM, Zeeman SC (2008) BETA-AMYLASE 4, a non-catalytic protein that regulates leaf starch breakdown upstream of three active alpha-amylases in Arabidopsis chloroplasts. The Plant Cell 20(4):1040-58. PUBMED online Impact Factor: 11.0
16. Bechtold U, Richard O, Zamboni A, Gapper C, Geisler M, Pogson BJ, Karpinski S, Mullineaux PM (2008) Impact of chloroplast- and extracellular-srouced ROS on high light-responsive gene expression in Arabidopsis. Journal of Experimental Botany 59(2):121-33. PUBMED online Impact Factor: 4.0
15. Osmond CB, Forster B, Pogson BJ (2008) Dynamics of the truncated lutein epoxide cycle in avocado (Persea Americana L.); implications for efficiency of light harvesting In: Allen JF, Grantt E. Golbeck, JH Osmond CB (eds) Photosynthesis. Energy from the Sun, Springer, Dordrecht (2008) Vol 2: 1031-1034. ISBN 978-1-4020-6707-5 URL . Impact Factor: unknown
14. Takahashi S, Whitney S, Itoh S, Maruyama T, Badger MR (2008) Heat stress causes inhibition of the de novo synthesis of antenna proteins and photobleaching in cultured Symbiodinium. Proceedings of the National Academy of Sciences USA 105(11):, 4203-4208. PUBMED online Impact Factor: 10.0
13. Baroli I, Price GD, Badger MR, von Caemmerer S (2008) The contribution of photosynthesis to the red light response of stomatal conductance Plant Physiology 146(2): 737-747. PUBMED online Impact Factor: 6.0
12. Hendrickson L, Sharwood R, Ludwig M, Whitney SM, Badger MR, von Caemmerer S (2008) The effects of Rubisco activase on C4 photosynthesis and metabolism at high temperature. Journal of Experimental Botany 59(7):1789-1798. PUBMED online Impact Factor: 4.0
11. Badger MR, Bek EJ (2008) Multiple Rubisco forms in Proteobacteria: their functional significance in relation to CO2 acquisition by the CBB cycle. Journal of Experimental Botany 59(7):1525-1541. PUBMED online Impact Factor: 4.0
10. Cousins AB, Badger MR, von Caemmerer S (2008) C4 photosynthetic isotope exchange in NAD-ME and NADP-ME type grasses Journal of Experimental Botany 59(7):1695-1703. PUBMED online Impact Factor: 4.0
9. Carroll AJ, Heazlewood JL, Ito J, Millar AH (2008) Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Molecular and Cellular Proteomics 7, 347-369 . PUBMED online Impact Factor: 10.0
8. Meyer EH, Taylor NL, Millar AH (2008) Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis J. Proteome Research 7(2): 786-94 . PUBMED online Impact Factor: 5.46
7. Losciale P, Oguchi R, Hendrickson L, Hope AB, Corelli-Grappadelli L, Chow WS (2008) A rapid, whole tissue determination of the functional fraction of photosystem II after photoinhibition of leaves based on flash-induced P700 redox kinetics Physiologia Plantarum 132, 23-32. PUBMED online Impact Factor: 2.0
6. O'Toole N, Vakser I (2008) Large-scale characteristics of the energy landscape in protein-protein interactions Proteins-Structure Function and Bioinformatics 71(1): 144-52 . PUBMED online Impact Factor: 4.0
5. Heazlewood JL, Durek P, Hummel J, Selbig J, Weckwerth W, Walther D, Schulze WX (2008) PhosPhAt: A database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor Nucleic Acids Research 36, D1015-1021. PUBMED online Impact Factor: 8.0
4. Meyer EH, Millar AH (2008) Isolation of mitochondria from plant cell culture In: 2D PAGE: Sample preparation and fractionation, Methods in Molecular Biology, Humana Press, USA. ISBN 978-1-60327-209-4 URL Vol 425, pp 161-169. Impact Factor: unknown
3. Jellicoe MM, Nichols SJ, Callus BA, Baker MV, Barnard PJ, Berners-Price SJ, Whelan J, Yeoh GC, Filipovska A (2008) Bioenergetic differences selectively sensitize tumorigenic liver progenitor cells to a new gold(I) compound Carcinogenesis 29(6): 1124-1133. PUBMED online Impact Factor: 5.402
2. Black S, Stanley WA, Filipp FV, Bhairo M, Verma A, Wichmann O, Sattler M, Wilmanns M, Schultz C (2008) Probing lipid and drug binding domains with fluorescent dyes Bioorganic and Medicinal Chemistry 16, 1162-73 . PUBMED online Impact Factor: 3.108
1. Price GD, Badger MR, Woodger FJ, Long BM (2008) Advances in understanding the cyanobacterial CO2-concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants Journal of Experimental Botany 59(7):1441-61. PUBMED online Impact Factor: 4.0

2008 Statistics

  • 40 publications in 23 different journals
  • No. Impact Factor >5 <10: 13
  • No. Impact Factor >=10: 10
  • Average Impact Factor: 7.19 (258.70/36)

Publications by Centre Staff - 2007

49. Footitt S, Cornah JE, Pracharoenwattana I, Bryce JH, Smith SM (2007) The Arabidopsis 3-ketoacyl-CoA thiolase-2 (kat2-1) mutant exhibits increased flowering but reduced reproductive success Journal of Experimental Botany 58:2959-68. PUBMED online Impact Factor: 4.0
48. Glaring MA, Zygadlo A, Thorneycroft D, Schulz A, Smith SM, Blennow A, Baunsgaard L (2007) An extra-plastidial alpha-glucan, water dikinase from Arabidopsis phosphorylates amylopectin in vitro and is not necessary for transient starch degradation Journal of Experimental Botany 58(14): 3949-60. PUBMED online Impact Factor: 4.0
47. Rossel JB, Wilson PB, Hussain D, Woo NS, Gordon MJ, Mewett OP, Howell KA, Whelan J, Kazan K, Pogson BJ (2007) Systemic and Intracellular Response to Photooxidative stress in Arabidopsis. The Plant Cell 19(12): 4091-4110. PUBMED online Impact Factor: 11.0
46. Griffiths H, Cousins AB, Badger MR, von Caemmerer S (2007) Discrimination in the Dark. Resolving the Interplay between Metabolic and Physical Constraints to PEPC Activity during the CAM Cycle Plant Physiology 143(2): 1055-67. PUBMED online Impact Factor: 6.0
45. McConnell IL, Badger MR, Wydrzynski T, Hillier W (2007) A Quantitative Assessment of the Carbonic Anhydrase Activity in Photosystem II Biochimica et Biophysica Acta - Bioenergetics 1767(6): 639-647. PUBMED online Impact Factor: 4.663
44. Takahashi S, Bauwe H, Badger MR (2007) Impairment of the photorespiratory pathway accelerates photoinhibition of photosystem II by suppression of repair and not acceleration of damage processes in Arabidopsis thaliana Plant Physiology 144(1): 487-494. PUBMED online Impact Factor: 6.0
43. Mueller-Cajar O, Badger MR (2007) New roads lead to Rubisco in Archaebacteria Bioessays 29(8): 722-724. PUBMED online Impact Factor: 6.0
42. Long BM, Badger MR, Whitney SM, Price GD (2007) Analysis of carboxysomes from Synechococcus PCC7942 reveals multiple Rubisco complexes with carboxysomal proteins CcmM & CcaA The Journal of Biological Chemistry 282(40): 29323-35. PUBMED online Impact Factor: 6.0
41. Cousins AB, Baroli I, Badger MR, Ivakov A, Lea PJ, Leegoog RC, von Caemmerer S (2007) The role of phosphoenolpyruvate carboxylase (PEPC) during C4 photosynthetic isotope exchange and stomatal conductance. Plant Physiology 145(3): 1006-1017. PUBMED online Impact Factor: 6.0
40. Mc Nevin DB, Badger MR, Whitney S, von Caemmerer S, Tcherkez G, Farquhar GD (2007) Differences in carbon isotope discrimination of three variant Rubiscos reflect differences in their catalytic mechanism The Journal of Biological Chemistry 282(49): 36068-36076 . PUBMED online Impact Factor: 6.0
39. Edner C, Li J, Albrecht T, Mahlow S, Hejazi M, Hussain H, Kaplan F, Guy C, Smith SM, Steup M, Ritte G (2007) Glucan, Water Dikinase Activity Stimulates Breakdown of Starch Granules by Plastidial β-Amylases Plant Physiology 145(1): 17-28. PUBMED online Impact Factor: 6.0
38. Narsai R, Howell KA, Millar AH, O'Toole N, Small ID, Whelan J (2007) Genome-Wide Analysis of mRNA Decay Rates and their Determinants in Arabidopsis thaliana The Plant Cell 19, 3418-3436. PUBMED online Impact Factor: 11.0
37. Winger AM, Taylor NL, Heazlewood JL, Day DA, Millar AH (2007) The cytotoxic lipid peroxidation product 4-hydroxy-2-nonenal covalently modifies a selective range of proteins linked to respiratory function in plant mitochondria The Journal of Biological Chemistry 282(52): 37436-37447. PUBMED online Impact Factor: 6.0
36. Stanley WA (2007) Advances in Structural Biology and Structure Prediction Current Science 93(6): 755-757. Impact Factor: 1.0
35. Stanley WA, Fodor K, Marti-Renom MA, Schliebs W, Wilmanns M (2007) Protein import into peroxisomes by ring-shaped import receptors FEBS Letters 581(25), 4795-4802. PUBMED online Impact Factor: 3.0
34. Delannoy E, Stanley WA, Bond CS, Small ID (2007) Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles Biochemical Society Transactions 35, 1643-1647. PUBMED online Impact Factor: 3.989
33. Kursula P, Kursula I, Massimi M, Song Y-H, Downer J, Stanley WA, Witke W, Wilmanns M (2007) High-resolution structural analysis of mammalian profilin IIa complex formation with two physiological ligands: the formin homology 1 domain of mDia1 and the proline-rich domain of VASP Journal of Molecular Biology 375, 270-90. PUBMED online Impact Factor: 5.0
32. Falcon de Longevialle AF, Meyer EH, Andrés C, Taylor NL, Lurin C, Millar AH, Small ID (2007) The Pentatricopeptide Repeat Gene OTP43 is Required for trans-Splicing of the Mitochondrial nad1 Intron 1 in Arabidopsis thaliana The Plant Cell 19(10): 3256-3265. PUBMED online Impact Factor: 11.0
31. Lister R, Carrie C, Duncan O, Ho LHM, Howell KA, Murcha MW, Whelan J (2007) Functional Definition of Outer Membrane Proteins Involved in Preprotein Import into Mitochondria The Plant Cell 19, 3739-3759. PUBMED online Impact Factor: 11.0
30. Thatcher LF, Carrie C, Andersson CR, Sivasithamparam K, Whelan J, Singh KB (2007) Differential gene expression and subcellular targeting of Arabidopsis glutathione S-transferase F8 is achieved through alternative transcription start sites The Journal of Biological Chemistry 282(39), 28915-28928. PUBMED online Impact Factor: 6.0
29. Olejnik K, Murcha MW, Whelan J, Kraszewska E (2007) Cloning and characterisation of AtNUDT13, a novel mitochondrial Arabidopsis thaliana Nudix hydrolase specific for long-chain diadenosine polyphosphates FEBS Journal 274(18), 4877-4855. PUBMED online Impact Factor: 3.0
28. Howell KA, Millar AH, Whelan J (2007) Building the Powerhouse. What are the signals involved in plant mitochondrial biogenesis Plant Signaling and Behavior 2(5): 428-430. PUBMED Impact Factor: 2.0
27. Saloné V, Rãdinger M, Polsakiewicz M, Hoffmann B, Groth-Malonek M, Szurek B, Small ID, Knoop V, Lurin C (2007) A hypothesis on the identification of the editing enzyme in plant organelles FEBS Letters 581(22), 4132-8. PUBMED online Impact Factor: 3.0
26. Chateigner-Boutin A-L, Small ID (2007) A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons Nucleic Acids Research 35(17): e114. PUBMED online Impact Factor: 8.0
25. Geisler-Lee J, O'Toole N, Ammar R, Provart NJ, Millar AH, Geisler M (2007) A Predicted Interactome for Arabidopsis Plant Physiology 145(2): 317-29. PUBMED online Impact Factor: 6.0
24. Winger AM, Taylor NL, Heazlewood JL, Day DA, Millar AH (2007) Identification of intra- and inter-molecular disulfide bonding in the plant mitochondrial proteome by diagonal gel electrophoresis Proteomics 7(22): 4158-70. PUBMED online Impact Factor: 6.0
23. Eubel H, Lee CP, Kuo J, Meyer EH, Taylor NL, Millar AH (2007) Free Flow Electrophoresis for Purification of Plant Mitochondria by Surface Charge The Plant Journal 52(3): 583-594. PUBMED online Impact Factor: 7.0
22. Legen J, Wanner G, Herrmann RG, Small ID, Schmitz-Linneweber C (2007) Plastid tRNA Genes trnC-GCA and trnN-GUU are essential for plant cell development The Plant Journal 51(5): 751-62. PUBMED online Impact Factor: 7.0
21. Maliga P, Small ID (2007) Plant biotechnology 2007: all three genomes make contributions to progress Current Opinion in Biotechnology 18, 97-99. online Impact Factor: 7.0
20. Pusnik M, Small ID, Read LK, Fabbro T, Schneider A (2007) Pentatricopeptide repeat proteins in T. brucei function in mitochondrial ribosomes Molecular and Cellular Biology 27(19): 6876-88. PUBMED online Impact Factor: 7.0
19. Small ID (2007) RNAi for revealing and engineering plant gene functions Current Opinion in Biotechnology 18(2): 148-153. PUBMED online Impact Factor: 7.0
18. Glaser E, Whelan J (2007) Import of nuclear-encoded mitochondrial proteins. In: Plant Mitochondria, Logan, D.C. (ed.). Annual Plant Reviews 31, Chapter 4, pp 97-128, Blackwell Publishing Ltd, Oxford. URL . Impact Factor: unknown
17. Cuttriss AJ, Chubb AC, Alawady A, Grimm B, Pogson BJ (2007) Regulation of lutein biosynthesis and prolamellar body formation in Arabidopsis Functional Plant Biology 34(8): 663-672. online Impact Factor: 2.0
16. Howell KA, Cheng K, Murcha MW, Jenkin LE, Millar AH, Whelan J (2007) Oxygen initiation of respiration and mitochondrial biogenesis in rice The Journal of Biological Chemistry 282(21): 15619-15631. PUBMED online Impact Factor: 6.0
15. Ho LH, Giraud E, Lister R, Thirkettle-Watts D, Low J, Clifton R, Howell KA, Carrie C, Donald T, Whelan J (2007) Characterisation of the Regulatory and Expression Context of an Alternative Oxidase Gene Provides Insights into Cyanide Insensitive Respiration during Growth and Development Plant Physiology 143(4): 1519-33. PUBMED online Impact Factor: 6.0
14. Pracharoenwattana I, Cornah JE, Smith SM (2007) Arabidopsis peroxisomal malate dehydrogenase functions in beta-oxidation but not the glyoxylate cycle The Plant Journal 50(3): 381-390. PUBMED online Impact Factor: 7.0
13. McNevin DB, Badger MR, Kane HJ, Farquhar GD (2007) Measurement of (carbon) kinetic isotope effect by Rayleigh fractionation using membrane inlet mass spectrometry for CO2 consuming reactions Functional Plant Biology 33(12): 1115-1128. PUBMED online Impact Factor: 2.0
12. Fan D-Y, Nie Q, Hope AB, Hillier W, Pogson BJ, Chow WS (2007) Quantification of cyclic electron flow around Photosystem I in spinach leaves during photosynthetic induction Photosynthesis Research 94, 347-357. PUBMED online Impact Factor: 2.0
11. Meyer EH, Heazlewood JL, Millar AH (2007) Mitochondrial acyl carrier proteins in Arabidopsis thaliana are predominantly soluble matrix proteins and none can be confirmed as subunits of respiratory Complex I Plant Molecular Biology 64, 319-327. PUBMED online Impact Factor: 3.0
10. Heazlewood JL, Millar AH (2007) Arabidopsis Mitochondrial Proteomics In: Mitochondria Practical Protocols, Chapter 38 Methods in Molecular Biology Vol 372. Humana Press, pp 559-571. ISBN 978-1-59745-365-3 Abstract . Impact Factor: unknown
9. Taylor NL, Millar AH (2007) Oxidative Stress and Plant Mitochondria. In: Mitochondria Practical Protocols, Chapter 28, Methods in Molecular Biology Vol 372. Humana Press, pp 389-403. ISBN 978-1-59745-365-3 Abstract . Impact Factor: unknown
8. Murcha MW, Elhafez D, Lister R, Tonti-Filippini J, Baumgartner M, Philippar K, Carrie C, Mokranjac D, Soll J, Whelan J (2007) Characterisation of the preprotein and amino acid transporter family in Arabidopsis Plant Physiology 143(1): 199-212. PUBMED online Impact Factor: 6.0
7. Carrie C, Murcha MW, Millar AH, Smith SM, Whelan J (2007) Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria Plant Molecular Biology 63:97-108. PUBMED online Impact Factor: 3.0
6. Heazlewood JL, Verboom RE, Tonti-Filippini J, Small ID, Millar AH (2007) SUBA: The Arabidopsis Subcellular Database Nucleic Acids Research 35, D213-8. PUBMED online Impact Factor: 8.0
5. Clifton R, Whelan J (2007) Plant Mitochondrial Transcriptomics by Quantitative Real-Time PCR In: Mitochondria Practical Protocols, Chapter 36, Methods in Molecular Biology Vol 372, Humana Press pp529-542. ISBN 978-1-59745-365-3 Abstract . Impact Factor: unknown
4. Millar AH, Liddell A, Leaver CJ (2007) Isolation and Sub-Fractionation of Mitochondria from Plants In: Methods in Cell Biology on Mitochondria, Pon LA and Schon EA (Eds.) Academic Press, Inc. Vol 80, pp 66-87. ISBN 973-0-12-544173-5 URL . Impact Factor: unknown
3. Zeeman SC, Smith SM, Smith AM (2007) The diurnal metabolism of leaf starch Biochemical Journal 401(1):13-28. PUBMED online Impact Factor: 5.016
2. Ito J, Heazlewood JL, Millar AH (2007) The plant mitochondrial proteome and the challenge of defining the post-translational modifications responsible for signaling and stress effects on respiratory functions Physiologia Plantarum 129, 207-224. online Impact Factor: 2.0
1. Andrés C, Lurin C, Small ID (2007) The multifarious roles of PPR proteins in plant mitochondrial gene expression Physiologia Plantarum 129, 14-22. online Impact Factor: 2.0

2007 Statistics

  • 49 publications in 23 different journals
  • No. Impact Factor >5 <10: 23
  • No. Impact Factor >=10: 4
  • Average Impact Factor: 5.47 (240.67/44)

Publications by Centre Staff - 2006

26. Cousins AB, Badger MR, von Caemmerer S (2006) A transgenic approach to understanding the influence of carbonic anhydrase on C18OO discrimination during C4 photosynthesis Plant Physiology 142(2): 662-72. PUBMED online Impact Factor: 6.0
25. Heazlewood JL, Millar AH (2006) Plant Proteomics: Challenges and Resources In: Plant Proteomics, Annual Plant Reviews, . Impact Factor: unknown
24. Eubel H, Heazlewood JL, Millar AH (2006) Isolation and sub-fractionation of plant mitochondria for proteomic analysis. In: In: Plant Proteomics: Methods and Protocols Vol 355, Humana Press, USA.pp 49-62 ISBN 978-1-58829-635-1 . PUBMED Impact Factor: unknown
23. Millar AH, Whelan J, Small ID (2006) Recent surprises in protein targeting to mitochondria and plastids Current Opinion in Plant Biology 9(6): 610-615. PUBMED online Impact Factor: 11.0
22. Ito J, Heazlewood JL, Millar AH (2006) Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphate interactions within the matrix J. Proteome Research 5, 3459-69. PUBMED online Impact Factor: 5.46
21. Hillier W, McConnell I, Badger MR, Boussac A, Klimov V, Dismukes GC, Wydrzynski T (2006) Quantitative assessment of instrisic carbonic anhydrase activity and the capacity for bicarbonate oxidation in photosystem II Biochemistry 45, 2094-2102. PUBMED online Impact Factor: 3.226
20. Cousins AB, Badger MR, von Caemmerer S (2006) Carbonic anhydrase and its influence on carbon isotope discrimination dur C4 photosynthesis: Insights from antisense RNA in Flaveria bidentis Plant Physiology 141(1): 232-42. PUBMED online Impact Factor: 6.0
19. Foley RC, Sappl PG, Perl-Treves R, Millar AH, Singh KB (2006) Desenitization of GSTF8 induction by a prior chemical treatment is long lasting and operates in a tissue-dependent manner. Plant Physiology 142(1): 245-53. PUBMED online Impact Factor: 6.0
18. Alexeyenko A, Millar AH, Whelan J, Sonnhammer ELL (2006) Chromosomal clustering of nuclear genes encoding mitochondrial and chloroplast proteins in Arabidopsis Trends in Genetics 22(11): 589-593. PUBMED online Impact Factor: 12.0
17. Kunze M, Pracharoenwattana I, Smith SM, Hartig A (2006) A central role for the peroxisomal membrane in glyoxylate cycle function Biochimica et Biophysica Acta - Molecular Cell Research 1763(12): 1441-52. PUBMED online Impact Factor: 5.016
16. Sundaramoorthy R, Micossi E, Alphey MS, Germain V, Bryce JH, Smith SM, Leonard GA, Hunter WN (2006) The Crystal Structure of a Plant 3-Ketoacyl-CoA Thiolase Reveals the Potential for Redox Control of Peroxisomal Fatty Acid β-Oxidation Journal of Molecular Biology 359(2): 347-57. PUBMED online Impact Factor: 5.0
15. Sun ZL, Lee HY, Matsubara S, Hope AB, Pogson BJ, Hong YN, Chow WS (2006) Photoprotection of residual functional Photosystem II units that survive illumination in the absence of repair, and their critical role in subsequent recovery Physiologia Plantarum 128, 415-424. online Impact Factor: 2.0
14. Forster B, Mathesius U, Pogson BJ (2006) Comparative proteomics of high light stress in the model alga Chlamydomonas reinhardtii Proteomics 6(15): 4309-20. PUBMED online Impact Factor: 6.0
13. DellaPenna D, Pogson BJ (2006) Vitamin synthesis in plants: tocopherols and carotenoids Annual Review of Plant Biology 57, 711-738. PUBMED online Impact Factor: 28.415
12. Howitt CA, Pogson BJ (2006) Carotenoid accumulation and function in seeds and non-green tissues Plant, Cell and Environment 29(3): 435-445. PUBMED online Impact Factor: 4.0
11. Rossel JB, Walter PB, Hendrickson L, Chow W, Poole A, Mullineaux P, Pogson BJ (2006) A mutation affecting ascorbate peroxidase 2 gene expression reveals a link between responses to high light and drought tolerance Plant, Cell and Environment 29(2): 269-281. PUBMED online Impact Factor: 4.0
10. Cuttriss AJ, Mimica J, Howitt C, Pogson BJ (2006) Carotenoid Metabolism. In: The Structure and Fuction of Plastids, Advances in Photosynthesis and Respiration Series Springer Vol 23, pp315-334 Hoober, K and Wise, R. (eds) ISBN: 978-1-4020-4060-3 URL. . Impact Factor: unknown
9. Howell KA, Millar AH, Whelan J (2006) Ordered assembly of mitochondria during rice germination begins with promitochondrial structures rich in components of the protein import apparatus Plant Molecular Biology 60, 201-23. PUBMED online Impact Factor: 3.0
8. Elhafez D, Murcha MW, Clifton R, Soole KL, Day DA, Whelan J (2006) Characterisation of Mitochondrial Alternative NAD(P)H Dehydrogenases in Arabidopsis: Intraorganelle Location and Expression Plant and Cell Physiology 47(1):43-54. PUBMED online Impact Factor: 3.0
7. Clifton R, Millar AH, Whelan J (2006) Alternative Oxidases in Arabidopsis: a comparative analysis of differential expression in the gene family provides new insights into function of non-phosphorylating bypasses Biochimica et Biophysica Acta - Bioenergetics 1757:730-41. PUBMED online Impact Factor: 4.663
6. Lister R, Whelan J (2006) Mitochondrial protein import: convergent solutions for receptor structure Current Biology 16(6): R197-9. PUBMED online Impact Factor: 11.435
5. Holt KE, Millar AH, Whelan J (2006) ModuleFinder and CoReg: linking gene expression modules with promoter sequences motifs to uncover gene regulation mechanisms in plants Plant Methods 2: 8. PUBMED online Impact Factor: 2.0
4. Niittyl T, Comparot-Moss S, Lue W-L, Messerli G, Trevisan M, Seymour MDJ, Gatehouse JA, Villadsen D, Smith SM, Chen J, Zeeman SC, Smith AM (2006) Similar protein phosphatases control starch metabolism in plants and glycogen metabolism in mammals The Journal of Biological Chemistry 281(17): 11815-8. PUBMED online Impact Factor: 6.0
3. Delatte T, Umhang M, Trevisan M, Eicke S, Thorneycroft D, Smith SM, Zeeman SC (2006) Evidence for distinct mechanisms of starch granule breakdown in plants The Journal of Biological Chemistry 281(17): 12050-9. PUBMED online Impact Factor: 6.0
2. Baker A, Graham IA, Holdsworth M, Smith SM, Theodoulou FL (2006) Chewing the fat: β-oxidation in signalling and development Trends in Plant Science 11(3): 124-32. PUBMED online Impact Factor: 10.0
1. Badger MR, Price GD, Long BM, Woodger FJ (2006) The environmental plasticity and ecological genomics of the cyanobacterial CO2 concentrating mechanism Journal of Experimental Botany 57(2): 249-65. PUBMED online Impact Factor: 4.0

2006 Statistics

  • 26 publications in 20 different journals
  • No. Impact Factor >5 <10: 8
  • No. Impact Factor >=10: 5
  • Average Impact Factor: 6.70 (154.21/23)

Publications by Centre Staff - 2005

26. Woodger FJ, Badger MR, Price GD (2005) Sensing of Inorganic Carbon Limitation in Synechococcus PCC7942 Is Correlated with the Size of the Internal Inorganic Carbon Pool and Involves Oxygen Plant Physiology 139(4): 1959-69. PUBMED online Impact Factor: 6.0
25. Murcha MW, Millar AH, Whelan J (2005) The N-terminal cleavable extension of plant carrier proteins is responsible for efficient insertion into the inner mitochondrial membrane Journal of Molecular Biology 351(1): 16-25. PUBMED online Impact Factor: 5.0
24. Heazlewood JL, Tonti-Filippini J, Verboom RE, Millar AH (2005) Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis Plant Physiology 139(2): 598-609. PUBMED online Impact Factor: 6.0
23. Eubel H, Braun HP, Millar AH (2005) Blue-Native PAGE in Plants: a Tool in Analysis of Protein-Protein Interactions Plant Methods 1: 11. PUBMED online Impact Factor: 2.0
22. Murcha MW, Rudhe C, Elhafez D, Adams KL, Daley DO, Whelan J (2005) Adaptations required for mitochondrial import following mitochondrial to nucleus gene transfer of ribosomal protein S10 Plant Physiology 138(4): 2134-44. PUBMED online Impact Factor: 6.0
21. Forster B, Osmond CB, Pogson BJ (2005) Improved survival of very high light and oxidative stress is conferred by spontaneous gain-of-function mutations in Chlamydomonas Biochimica et Biophysica Acta - Bioenergetics 1709(1):45-57. PUBMED online Impact Factor: 4.663
20. Duchene AM, Giritch A, Hoffmann B, Cognat V, Lancelin D, Peeters NM, Zaepfel M, Marechal-Drouard L, Small ID (2005) Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana Proceedings of the National Academy of Sciences USA 102(45):16484-16489. PUBMED online Impact Factor: 10.0
19. Aubourg S, Brunaud V, Bruyère C, Cock M, Cooke R, Cottet A, Couloux A, Dehais P, Deléage G, Duclert A, Echeverria M, Eschbach A, Falconet D, Filippi G, Gaspin C, Geourjon C, Grienenberger JM, Houlné G, Jamet E, Lechauve F, Leleu O, Leroy P, Mache R, Meyer C, Nedjari H, Negrutiu I, Orsini V, Peyretaillade E, Pommier C, Raes J, Risler JL, Rivière S, Rombauts S, Rouzé P, Schneider M, Schwob P, Small ID, Soumayet-Kampetenga G, Stankovski D, Toffano C, Tognolli M, Caboche M, Lecharny A (2005) GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts Nucleic Acids Research 33, D641-6. PUBMED online Impact Factor: 8.0
18. Lister R, Hulett JM, Lithgow T, Whelan J (2005) Protein import into mitochondria: endosymbiotic origins and functions today Molecular Membrane Biology 22(1-2): 87-100. PUBMED online Impact Factor: 3.075
17. Murcha MW, Elhafez D, Millar AH, Whelan J (2005) The C-terminal region of TIM 17 links the outer and inner mitochondrial membranes in Arabidopsis and is essential for protein import The Journal of Biological Chemistry 280(16): 16476-16483. PUBMED online Impact Factor: 6.0
16. Clifton R, Lister R, Parker KL, Sappl PG, Elhafez D, Millar AH, Day DA, Whelan J (2005) Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana Plant Molecular Biology 58, 193-212. PUBMED online Impact Factor: 3.0
15. Daley DO, Whelan J (2005) Why genes persist in organelle genomes Genome Biology 6(5): 110-115. PUBMED online Impact Factor: 10.0
14. Long BM, Price GD, Badger MR (2005) Proteomic assessment of an established yechnique for carboxysome enrichment from Synechococcus PCC7942 Canadian Journal of Botany 83(7): 746-757. online Impact Factor: 1.098
13. Woodger FJ, Badger MR, Price GD (2005) Regulation of cyanobacterial CO2-concentrating mechanisms through transcriptional induction of high-affinity-Ci transport systems Canadian Journal of Botany 83(7): 698-710. online Impact Factor: 1.098
12. Heazlewood JL, Millar AH (2005) AMPDB: The Arabidopsis Mitochondrial Protein Database Nucleic Acids Research 33, D605-D610. PUBMED online Impact Factor: 8.0
11. Noguchi K, Taylor NL, Millar AH, Lambers H, Day DA (2005) Response of mitochondria to light intensity in the leaves of sun and shade species Plant, Cell and Environment 28(6): 760-771. online Impact Factor: 4.0
10. Winger AM, Millar AH, Day DA (2005) Sensitivity of plant mitochondrial terminal oxidases to the lipid peroxidation product 4-hydroxy-2-nonenal (HNE) Biochemical Journal 387(3): 865-870. PUBMED online Impact Factor: 5.016
9. Huang S, Greenway H, Colmer TD, Millar AH (2005) Identification of proteins synthesised in rice coleoptiles during prolonged anoxia Annals of Botany 96(4):703-15. PUBMED online Impact Factor: 2.0
8. Taylor NL, Heazlewood JL, Day DA, Millar AH (2005) Differential Impact of environmental stresses on the pea mitochondrial proteome Molecular and Cellular Proteomics 4:1122-1133. PUBMED online Impact Factor: 10.0
7. Millar AH, Heazlewood JL, Kristensen B, Braun HP, Moller IM (2005) The Plant Mitochondrial Proteome Trends in Plant Science 10(1):36-43. PUBMED online Impact Factor: 10.0
6. Pogson BJ, Rissler HM, Frank HA (2005) The roles of carotenoids in photosystem II of higher plants In: Photosystem II: The Light-Driven Water/Plastoquinone Oxido-reductase in Photosynthesis. Advances in Photosynthesis and Respiration Series, Springer Wydrzynski T. and Satoh (eds) ISBN: 978-1-4020-4249-2 URL. . Impact Factor: unknown
5. Hendrickson L, Förster B, Pogson BJ, Chow WS (2005) A simple chlorophyll fluorescence parameter that correlates with the rate coefficient of photoinactivation of Photosystem II. Photosynthesis Research 84, 43-9. PUBMED online Impact Factor: 2.0
4. De Coninck B, Le Roy K, Francis I, Clerens S, Vergauwen R, Halliday A, Smith SM, Van Laere A, Van den Ende W (2005) AtcwINV3 and 6 are not invertases but are fructan exohydrolases with different substrate specificities Plant, Cell and Environment 28(4): 432-443. online Impact Factor: 4.0
3. Smith AM, Zeeman SC, Smith SM (2005) Starch degradation Annual Review of Plant Biology 56, 73-98. PUBMED online Impact Factor: 28.415
2. Yu Tien-Shin, Zeeman SC, Thorneycroft D, Fulton DC, Lue Wei-Ling, Hegemann B, Tung Shu-Yun, Umemoto T, Chapple A, Tsai D-L, Dunstan H, Wang Shue-Mei, Smith AM, Chen J, Smith SM (2005) Chloroplast alpha-amylase is not required for breakdown of transitory starch in Arabidopsis leaves The Journal of Biological Chemistry 280(11): 9773-9779. PUBMED online Impact Factor: 6.0
1. Pracharoenwattana I, Cornah JE, Smith SM (2005) Peroxisomal citrate synthase catalyses an essential step in the respiration of fatty acids during germination of Arabidopsis seeds and is required to break dormancy The Plant Cell 17, 2037-2048. PUBMED online Impact Factor: 11.0

2005 Statistics

  • 26 publications in 20 different journals
  • No. Impact Factor >5 <10: 8
  • No. Impact Factor >=10: 6
  • Average Impact Factor: 6.49 (162.37/25)

Total Statistics

  • 299 publications in 76 different journals
  • No. Impact Factor >5 <10: 108
  • No. Impact Factor >=10: 55
  • Average Impact Factor: 6.40 (1722.71/269)

Centre Publications

Chief Investigators

Personal Publications

  • Ian Small
  • Murray Badger
  • David Day
  • Harvey Millar
  • Barry Pogson
  • Steve Smith
  • Jim Whelan

    • More...


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    main page last modified: Thu Feb 2 13:24:14 2012